Functions for the analysis of infectious disease outbreaks in animal populations

Documentation for package ‘incursion’ version 0.1-18

inc.about	The library incursion: summary information
inc.den	Compute farm and animal density in an area around a defined point location
inc.edr	Compute estimated dissemination ratio
inc.fdi	First day incidence
inc.ffi	First fortnight incidence
inc.genint	Estimated generation intervals
inc.incubation	Estimated infection dates and incubation periods
inc.local	Local spread probabilities
inc.network	Data from a hypothetical tracing exercise
inc.outbreak	Data from a hypothetical outbreak of foot-and-mouth disease
inc.ripratio	At-risk infected place ratio
inc.selfsurv	Ratio of public reported diagnoses to surveillance activity diagnoses
inc.sna	Manipulate network data in edgelist format
inc.stkml	Export point locations and dates of events to a space-time KML file
inc.trace	Subset network data in edgelist format